Eguchipsammia fistula Microsatellite Development and Population Analysis

  • Mehreen Mughal

Student thesis: Master's Thesis

Abstract

Deep water corals are an understudied yet biologically important and fragile ecosystem under threat from recent increasing temperatures and high carbon dioxide emissions. Using 454 sequencing, we develop 14 new microsatellite markers for the deep water coral Eguchipsammia fistula, collected from the Red Sea but found in deep water coral ecosystems globally. We tested these microsatellite primers on 26 samples of this coral collected from a single population. Results show that these corals are highly clonal within this population stemming from a high level of asexual reproduction. Mitochondrial studies back up microsatellite findings of high levels of genetic similarity. CO1, ND1 and ATP6 mitochondrial sequences of E. fistula and 11 other coral species were used to build phylogenetic trees which grouped E. fistula with shallow water coral Porites rather than deep sea L. Petusa.
Date of AwardDec 2012
Original languageEnglish
Awarding Institution
  • Biological, Environmental Science and Engineering
SupervisorMichael Berumen (Supervisor)

Keywords

  • Deep sea coral
  • Eguchipsammia
  • Microsatellite

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