FoodON: A global farm-to-fork food ontology - The development of a universal food vocabulary

Emma Griffiths, Fiona Brinkman, Damion Dooley, Will Hsiao, Pier Buttigieg, Robert Hoehndorf

Research output: Chapter in Book/Report/Conference proceedingConference contribution

1 Scopus citations

Abstract

Several resources and standards for indexing food descriptors currently exist, but their content and interrelations are not semantically and logically coherent. Simultaneously, the need to represent knowledge about food is central to many fields including biomedicine and sustainable development. FoodON is a new ontology built to interoperate with the OBO Library and to represent entities which bear a "food role". It encompasses materials in natural ecosystems and food webs as well as human-centric categorization and handling of food. The latter will be the initial focus of the ontology, and we aim to develop semantics for food safety, food security, the agricultural and animal husbandry practices linked to food production, culinary, nutritional and chemical ingredients and processes. The scope of FoodON is ambitious and will require input from multiple domains. FoodON will import or map to material in existing ontologies and standards and will create content to cover gaps in the representation of food-related products and processes. As a robust food ontology can only be created by consensus and wide adoption, we are currently forming an international consortium to build partnerships, solicit domain expertise, and gather use cases to guide the ontology's development. The products of this work are being applied to research and clinical datasets such as those associated with the Canadian Healthy Infant Longitudinal Development (CHILD) study which examines the causal factors of asthma and allergy development in children, and the Integrated Rapid Infectious Disease Analysis (IRIDA) platform for genomic epidemiology and foodborne outbreak investigation.
Original languageEnglish (US)
Title of host publication2016 Joint International Conference on Biological Ontology and BioCreative - Food, Nutrition, Health and Environment for the 9 Billion, ICBO-BioCreative 2016
PublisherCEUR-WS
StatePublished - Jan 1 2016

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