Codon usage tabulated from the international DNA sequence databases

Y. Nakamura*, Takashi Gojobori, T. Ikemura

*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

65 Scopus citations

Abstract

CUTG (codon usage tabulated from GenBank) is a comprehensive database for codon usage. The codon usage for each full-length protein gene has been calculated using the nucleotide sequence obtained from GenBank sequence database. The sum of the codon use of each organism has been also calculated. The data files can be obtained from anonymous ftp sites of DDBJ, DISC and EBI. The list of codon usage of genes in organisms was made searchable by name of organism through a web site http://www.dna.affrc.go.jp/ ~ nakamura/CUTG.html The compilation is synchronized with major release of GenBank.

Original languageEnglish (US)
Number of pages1
JournalNucleic acids research
Volume26
Issue number1
DOIs
StatePublished - Jan 1 1998

ASJC Scopus subject areas

  • Genetics

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