Codon usage tabulated from the international DNA sequence databases

Yasukazu Nakamura*, Takashi Gojobori, Toshimichi Ikemura

*Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

74 Scopus citations

Abstract

The codon usage in individual protein genes has been calculated using the nucleotide sequence obtained from the GenBank Genetic Sequence Database. Sum of the codon use of each organism has been also calculated. The data files can be obtained from anonymous ftp sites of DDBJ, DISC and EBI. The list of codon usage of genes in organisms was made searchable by name of organism through a web site. The compilation has been synchronized with a major release of GenBank.

Original languageEnglish (US)
Pages (from-to)244-245
Number of pages2
JournalNucleic acids research
Volume25
Issue number1
DOIs
StatePublished - Jan 1 1997

ASJC Scopus subject areas

  • Genetics

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