• Source: Scopus
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1985 …2021

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  • 2010

    Erratum: Genome sequence of the palaeopolyploid soybean (Nature (2010) 463 (178-183))

    Schmutz, J., Cannon, S. B., Schlueter, J., Ma, J., Mitros, T., Nelson, W., Hyten, D. L., Song, Q., Thelen, J. J., Cheng, J., Xu, D., Hellsten, U., May, G. D., Yu, Y., Sakurai, T., Umezawa, T., Bhattacharyya, M. K., Sandhu, D., Valliyodan, B., Lindquist, E. & 25 others, Peto, M., Grant, D., Shu, S., Goodstein, D., Barry, K., Futrell-Griggs, M., Abernathy, B., Du, J., Tian, Z., Zhu, L., Gill, N., Joshi, T., Libault, M., Sethuraman, A., Zhang, X. C., Shinozaki, K., Nguyen, H. T., Wing, R. A., Cregan, P., Specht, J., Grimwood, J., Rokhsar, D., Stacey, G., Shoemaker, R. C. & Jackson, S. A., May 6 2010, In: Nature. 465, 7294

    Research output: Contribution to journalArticlepeer-review

    25 Scopus citations
  • Extensive gene conversion drives the concerted evolution of paralogous copies of the SRY gene in European rabbits

    Geraldes, A., Rambo, T., Wing, R. A., Ferrand, N. & Nachman, M. W., Nov 1 2010, In: Molecular Biology and Evolution. 27, 11

    Research output: Contribution to journalArticlepeer-review

    21 Scopus citations
  • Genome sequence of the palaeopolyploid soybean

    Schmutz, J., Cannon, S. B., Schlueter, J., Ma, J., Mitros, T., Nelson, W., Hyten, D. L., Song, Q., Thelen, J. J., Cheng, J., Xu, D., Hellsten, U., May, G. D., Yu, Y., Sakurai, T., Umezawa, T., Bhattacharyya, M. K., Sandhu, D., Valliyodan, B., Lindquist, E. & 25 others, Peto, M., Grant, D., Shu, S., Goodstein, D., Barry, K., Futrell-Griggs, M., Abernathy, B., Du, J., Tian, Z., Zhu, L., Gill, N., Joshi, T., Libault, M., Sethuraman, A., Zhang, X. C., Shinozaki, K., Nguyen, H. T., Wing, R. A., Cregan, P., Specht, J., Grimwood, J., Rokhsar, D., Stacey, G., Shoemaker, R. C. & Jackson, S. A., Jan 14 2010, In: Nature. 463, 7278

    Research output: Contribution to journalArticlepeer-review

    2746 Scopus citations
  • Genomic structure and evolution of the Pi2/9 locus in wild rice species

    Dai, L., Wu, J., Li, X., Wang, X., Liu, X., Jantasuriyarat, C., Kudrna, D., Yu, Y., Wing, R. A., Han, B., Zhou, B. & Wang, G. L., Jul 1 2010, In: Theoretical and Applied Genetics. 121, 2

    Research output: Contribution to journalArticlepeer-review

    21 Scopus citations
  • Orthologous comparisons of the Hd1 region across genera reveal hd1 gene lability within diploid oryza species and disruptions to microsynteny in sorghum

    Sanyal, A., Ammiraju, J. S. S., Lu, F., Yu, Y., Rambo, T., Currie, J., Kollura, K., Kim, H. R., Chen, J., Ma, J., San Miguel, P., Mingsheng, C., Wing, R. A. & Jackson, S. A., Nov 1 2010, In: Molecular Biology and Evolution. 27, 11

    Research output: Contribution to journalArticlepeer-review

    26 Scopus citations
  • Phylogenomic analysis of BAC-end sequence libraries in Oryza (Poaceae)

    Cranston, K. A., Hurwitz, B., Sanderson, M. J., Ware, D., Wing, R. A. & Stein, L., Jul 1 2010, In: Systematic Botany. 35, 3

    Research output: Contribution to journalArticlepeer-review

    8 Scopus citations
  • Rice structural variation: A comparative analysis of structural variation between rice and three of its closest relatives in the genus Oryza

    Hurwitz, B. L., Kudrna, D., Yu, Y., Sebastian, A., Zuccolo, A., Jackson, S. A., Ware, D., Wing, R. A. & Stein, L., Sep 1 2010, In: Plant Journal. 63, 6

    Research output: Contribution to journalArticlepeer-review

    37 Scopus citations
  • Spatio-temporal patterns of genome evolution in allotetraploid species of the genus Oryza

    Ammiraju, J. S. S., Fan, C., Yu, Y., Song, X., Cranston, K. A., Pontaroli, A. C., Lu, F., Sanyal, A., Jiang, N., Rambo, T., Currie, J., Collura, K., Talag, J., Bennetzen, J. L., Chen, M., Jackson, S. & Wing, R. A., Aug 1 2010, In: Plant Journal. 63, 3

    Research output: Contribution to journalArticlepeer-review

    36 Scopus citations
  • The future of rice genomics: Sequencing the collective Oryza genome

    Goicoechea, J. L., Ammiraju, J. S. S., Marri, P. R., Chen, M., Jackson, S., Yu, Y., Rounsley, S. & Wing, R. A., Sep 1 2010, In: Rice. 3, 2-3

    Research output: Contribution to journalArticlepeer-review

    12 Scopus citations
  • The Oryza BAC resource: A genus-wide and genome scale tool for exploring rice genome evolution and leveraging useful genetic diversity from wild relatives

    Ammiraju, J. S. S., Song, X., Luo, M., Sisneros, N., Angelova, A., Kudrna, D., Kim, H., Yu, Y., Goicoechea, J. L., Lorieux, M., Kurata, N., Brar, D., Ware, D., Jackson, S. & Wing, R. A., Dec 1 2010, In: Breeding Science. 60, 5

    Research output: Contribution to journalArticlepeer-review

    23 Scopus citations
  • 2009

    A lineage-specific centromere retrotransposon in Oryza brachyantha

    Gao, D., Gill, N., Kim, H. R., Walling, J. G., Zhang, W., Fan, C., Yu, Y., Ma, J., Sanmiguel, P., Jiang, N., Cheng, Z., Wing, R. A., Jiang, J. & Jackson, S. A., Dec 1 2009, In: Plant Journal. 60, 5

    Research output: Contribution to journalArticlepeer-review

    33 Scopus citations
  • A single molecule scaffold for the maize genome

    Zhou, S., Wei, F., Nguyen, J., Bechner, M., Potamousis, K., Goldstein, S., Pape, L., Mehan, M. R., Churas, C., Pasternak, S., Forrest, D. K., Wise, R., Ware, D., Wing, R. A., Waterman, M. S., Livny, M. & Schwartz, D. C., Nov 1 2009, In: PLoS Genetics. 5, 11

    Research output: Contribution to journalArticlepeer-review

    110 Scopus citations
  • Comparative sequence analysis of MONOCULM1-orthologous regions in 14 Oryza genomes

    Lu, F., Ammiraju, J. S. S., Sanyal, A., Zhang, S., Son, R., Chen, J., Li, G., Sui, Y., Song, X., Cheng, Z., De Oliveira, A. C., Bennetzen, J. L., Jackson, S. A., Wing, R. A. & Chena, M., Feb 10 2009, In: Proceedings of the National Academy of Sciences of the United States of America. 106, 6

    Research output: Contribution to journalArticlepeer-review

    89 Scopus citations
  • Comparative sequence analysis of the SALT OVERLY SENSITIVE1 orthologous region in Thellungiella halophila and Arabidopsis thaliana

    Nah, G., Pagliarulo, C. L., Mohr, P. G., Luo, M., Sisneros, N., Yu, Y., Collura, K., Currie, J., Goicoechea, J. L., Wing, R. A. & Schumaker, K. S., Sep 1 2009, In: Genomics. 94, 3

    Research output: Contribution to journalArticlepeer-review

    12 Scopus citations
  • De novo next generation sequencing of plant genomes

    Rounsley, S., Marri, P. R., Yu, Y., He, R., Sisneros, N., Goicoechea, J. L., Lee, S. J., Angelova, A., Kudrna, D., Luo, M., Affourtit, J., Desany, B., Knight, J., Niazi, F., Egholm, M. & Wing, R. A., Mar 1 2009, In: Rice. 2, 1

    Research output: Contribution to journalArticlepeer-review

    52 Scopus citations
  • Detailed analysis of a contiguous 22-Mb region of the maize genome

    Wei, F., Stein, J. C., Liang, C., Zhang, J., Fulton, R. S., Baucom, R. S., De Paoli, E., Zhou, S., Yang, L., Han, Y., Pasternak, S., Narechania, A., Zhang, L., Yeh, C. T., Ying, K., Nagel, D. H., Collura, K., Kudrna, D., Currie, J., Lin, J. & 35 others, Kim, H. R., Angelova, A., Scara, G., Wissotski, M., Golser, W., Courtney, L., Kruchowski, S., Graves, T. A., Rock, S. M., Adams, S., Fulton, L. A., Fronick, C., Courtney, W., Kramer, M., Spiegel, L., Nascimento, L., Kalyanaraman, A., Chaparro, C., Deragon, J. M., Miguel, P. S., Jiang, N., Wessler, S. R., Green, P. J., Yu, Y., Schwartz, D. C., Meyers, B. C., Bennetzen, J. L., Martienssen, R. A., McCombie, W. R., Aluru, S., Clifton, S. W., Schnable, P. S., Ware, D., Wilson, R. K. & Wing, R. A., Nov 1 2009, In: PLoS Genetics. 5, 11

    Research output: Contribution to journalArticlepeer-review

    38 Scopus citations
  • Hamiltonella defensa, genome evolution of protective bacterial endosymbiont from pathogenic ancestors

    Degnan, P. H., Yu, Y., Sisneros, N., Wing, R. A. & Moran, N. A., Jun 2 2009, In: Proceedings of the National Academy of Sciences of the United States of America. 106, 22

    Research output: Contribution to journalArticlepeer-review

    176 Scopus citations
  • Human gut microbiota in obesity and after gastric bypass

    Zhang, H., DiBaise, J. K., Zuccolo, A., Kudrna, D., Braidotti, M., Yu, Y., Parameswaran, P., Crowell, M. D., Wing, R., Rittmann, B. E. & Krajmalnik-Brown, R., Feb 17 2009, In: Proceedings of the National Academy of Sciences of the United States of America. 106, 7

    Research output: Contribution to journalArticlepeer-review

    1258 Scopus citations
  • Species trees from highly incongruent gene trees in rice

    Cranston, K. A., Hurwitz, B., Ware, D., Stein, L. & Wing, R. A., Oct 1 2009, In: Systematic Biology. 58, 5

    Research output: Contribution to journalArticlepeer-review

    78 Scopus citations
  • The B73 maize genome: Complexity, diversity, and dynamics

    Schnable, P. S., Ware, D., Fulton, R. S., Stein, J. C., Wei, F., Pasternak, S., Liang, C., Zhang, J., Fulton, L., Graves, T. A., Minx, P., Reily, A. D., Courtney, L., Kruchowski, S. S., Tomlinson, C., Strong, C., Delehaunty, K., Fronick, C., Courtney, B., Rock, S. M. & 137 others, Belter, E., Du, F., Kim, K., Abbott, R. M., Cotton, M., Levy, A., Marchetto, P., Ochoa, K., Jackson, S. M., Gillam, B., Chen, W., Yan, L., Higginbotham, J., Cardenas, M., Waligorski, J., Applebaum, E., Phelps, L., Falcone, J., Kanchi, K., Thane, T., Scimone, A., Thane, N., Henke, J., Wang, T., Ruppert, J., Shah, N., Rotter, K., Hodges, J., Ingenthron, E., Cordes, M., Kohlberg, S., Sgro, J., Delgado, B., Mead, K., Chinwalla, A., Leonard, S., Crouse, K., Collura, K., Kudrna, D., Currie, J., He, R., Angelova, A., Rajasekar, S., Mueller, T., Lomeli, R., Scara, G., Ko, A., Delaney, K., Wissotski, M., Lopez, G., Campos, D., Braidotti, M., Ashley, E., Golser, W., Kim, H., Lee, S., Lin, J., Dujmic, Z., Kim, W., Talag, J., Zuccolo, A., Fan, C., Sebastian, A., Kramer, M., Spiegel, L., Nascimento, L., Zutavern, T., Miller, B., Ambroise, C., Muller, S., Spooner, W., Narechania, A., Ren, L., Wei, S., Kumari, S., Faga, B., Levy, M. J., McMahan, L., Van Buren, P., Vaughn, M. W., Ying, K., Yeh, C. T., Emrich, S. J., Jia, Y., Kalyanaraman, A., Hsia, A. P., Barbazuk, W. B., Baucom, R. S., Brutnell, T. P., Carpita, N. C., Chaparro, C., Chia, J. M., Deragon, J. M., Estill, J. C., Fu, Y., Jeddeloh, J. A., Han, Y., Lee, H., Li, P., Lisch, D. R., Liu, S., Liu, Z., Nagel, D. H., McCann, M. C., Sanmiguel, P., Myers, A. M., Nettleton, D., Nguyen, J., Penning, B. W., Ponnala, L., Schneider, K. L., Schwartz, D. C., Sharma, A., Soderlund, C., Springer, N. M., Sun, Q., Wang, H., Waterman, M., Westerman, R., Wolfgruber, T. K., Yang, L., Yu, Y., Zhang, L., Zhou, S., Zhu, Q., Bennetzen, J. L., Dawe, R. K., Jiang, J., Jiang, N., Presting, G. G., Wessler, S. R., Aluru, S., Martienssen, R. A., Clifton, S. W., McCombie, W. R., Wing, R. A. & Wilson, R. K., Nov 20 2009, In: Science. 326, 5956

    Research output: Contribution to journalArticlepeer-review

    2736 Scopus citations
  • The physical and genetic framework of the maize B73 genome

    Wei, F., Zhang, J., Zhou, S., He, R., Schaeffer, M., Collura, K., Kudrna, D., Faga, B. P., Wissotski, M., Golser, W., Rock, S. M., Graves, T. A., Fulton, R. S., Coe, E., Schnable, P. S., Schwartz, D. C., Ware, D., Clifton, S. W., Wilson, R. K. & Wing, R. A., Nov 1 2009, In: PLoS Genetics. 5, 11

    Research output: Contribution to journalArticlepeer-review

    80 Scopus citations
  • 2008

    A fruitful outcome to the papaya genome project

    Wei, F. & Wing, R. A., Jun 6 2008, In: Genome biology. 9, 6

    Research output: Contribution to journalArticlepeer-review

    6 Scopus citations
  • A phylogenetic analysis of indel dynamics in the cotton genus

    Grover, C. E., Yu, Y., Wing, R. A., Paterson, A. H. & Wendel, J. F., Jul 1 2008, In: Molecular Biology and Evolution. 25, 7

    Research output: Contribution to journalArticlepeer-review

    36 Scopus citations
  • A versatile transposon-based activation tag vector system for functional genomics in cereals and other monocot plants

    Qu, S., Desai, A., Wing, R. & Sundaresan, V., Jan 1 2008, In: Plant Physiology. 146, 1

    Research output: Contribution to journalArticlepeer-review

    57 Scopus citations
  • Construction, alignment and analysis of twelve framework physical maps that represent the ten genome types of the genus Oryza

    Kim, H. R., Hurwitz, B., Yu, Y., Collura, K., Gill, N., SanMiguel, P., Mullikin, J. C., Maher, C., Nelson, W., Wissotski, M., Braidotti, M., Kudrna, D., Goicoechea, J. L., Stein, L., Ware, D., Jackson, S. A., Soderlund, C. & Wing, R. A., Feb 28 2008, In: Genome biology. 9, 2

    Research output: Contribution to journalArticlepeer-review

    73 Scopus citations
  • Construction of an Amaranthus hypochondriacus bacterial artificial chromosome library and genomic sequencing of herbicide target genes

    Maughan, P. J., Sisneros, N., Luo, M., Kudrna, D., Ammiraju, J. S. S. & Wing, R. A., Mar 1 2008, In: Crop Science. 48, SUPPL. 1

    Research output: Contribution to journalArticlepeer-review

    17 Scopus citations
  • Diploid/polyploid syntenic shuttle mapping and haplotype-specific chromosome walking toward a rust resistance gene (Bru1) in highly polyploid sugarcane (2n ∼ 12x ∼ 115)

    Le Cunff, L., Garsmeur, O., Raboin, L. M., Pauquet, J., Telismart, H., Selvi, A., Grivet, L., Philippe, R., Begum, D., Deu, M., Costet, L., Wing, R., Glaszmann, J. C. & D'Hont, A., Sep 1 2008, In: Genetics. 180, 1

    Research output: Contribution to journalArticlepeer-review

    84 Scopus citations
  • Dynamic evolution of Oryza genomes is revealed by comparative genomic analysis of a genus-wide vertical data set

    Ammiraju, J. S. S., Lu, F., Sanyal, A., Yu, Y., Song, X., Jiang, N., Pontaroli, A. C., Rambo, T., Currie, J., Collura, K., Talag, J., Fan, C., Goicoechea, J. L., Zuccolo, A., Chen, J., Bennetzen, J. L., Chen, M., Jackson, S. & Wing, R. A., Dec 1 2008, In: Plant Cell. 20, 12

    Research output: Contribution to journalArticlepeer-review

    93 Scopus citations
  • Evidence of multiple horizontal transfers of the long terminal repeat retrotransposon RIRE1 within the genus Oryza

    Roulin, A., Piegu, B., Wing, R. A. & Panaud, O., Mar 1 2008, In: Plant Journal. 53, 6

    Research output: Contribution to journalArticlepeer-review

    59 Scopus citations
  • Methylation-sensitive linking libraries enhance gene-enriched sequencing of complex genomes and map DNA methylation domains

    Nelson, W., Luo, M., Ma, J., Estep, M., Estill, J., He, R., Talag, J., Sisneros, N., Kudrna, D., Kim, H. R., Ammiraju, J. S. S., Collura, K., Bharti, A. K., Messing, J., Wing, R. A., SanMiguel, P., Bennetzen, J. L. & Soderlund, C., Dec 19 2008, In: BMC Genomics. 9

    Research output: Contribution to journalArticlepeer-review

    8 Scopus citations
  • Microsatellite discovery from BAC end sequences and genetic mapping to anchor the soybean physical and genetic maps

    Shoemaker, R. C., Grant, D., Olson, T., Warren, W. C., Wing, R., Yu, Y., Kim, H., Cregan, P., Joseph, B., Futrell-Griggs, M., Nelson, W., Davito, J., Walker, J., Wallis, J., Kremitski, C., Scheer, D., Clifton, S. W., Graves, T., Nguyen, H., Wu, X. & 8 others, Luo, M., Dvorak, J., Nelson, R., Cannon, S., Tomkins, J., Schmutz, J., Stacey, G. & Jackson, S., Apr 1 2008, In: Genome. 51, 4

    Research output: Contribution to journalArticlepeer-review

    40 Scopus citations
  • Rapid and differential proliferation of the Ty3-Gypsy LTR retrotransposon Atlantys in the genus Oryza

    Zuccolo, A., Ammiraju, J. S. S., Kim, H. R., Sanyal, A., Jackson, S. & Wing, R. A., Sep 1 2008, In: Rice. 1, 1

    Research output: Contribution to journalArticlepeer-review

    6 Scopus citations
  • The Amborella genome: An evolutionary reference for plant biology

    Soltis, D. E., Albert, V. A., Leebens-Mack, J., Palmer, J. D., Wing, R. A., dePamphilis, C. W., Ma, H., Carlson, J. E., Altman, N., Kim, S., Kerr, P. K., Zuccolo, A. & Soltis, P. S., Mar 10 2008, In: Genome biology. 9, 3

    Research output: Contribution to journalArticlepeer-review

    52 Scopus citations
  • The promoter signatures in rice LEA genes can be used to build a co-expressing LEA gene network

    Meier, S., Gehring, C., MacPherson, C. R., Kaur, M., Maqungo, M., Reuben, S., Muyanga, S., Shih, M. D., Wei, F. J., Wanchana, S., Mauleon, R., Radovanovic, A., Bruskiewich, R., Tanaka, T., Mohanty, B., Itoh, T., Wing, R., Gojobori, T., Sasaki, T., Swarup, S. & 2 others, Hsing, Y. I. & Bajic, V. B., Dec 1 2008, In: Rice. 1, 2

    Research output: Contribution to journalArticlepeer-review

    13 Scopus citations
  • The Rice Annotation Project Database (RAP-DB): 2008 update

    Tanaka, T., Antonio, B. A., Kikuchi, S., Matsumoto, T., Nagamura, Y., Numa, H., Sakai, H., Wu, J., Itoh, T., Sasaki, T., Aono, R., Fujii, Y., Habara, T., Harada, E., Kanno, M., Kawahara, Y., Kawashima, H., Kubooka, H., Matsuya, A., Nakaoka, H. & 71 others, Saichi, N., Sanbonmatsu, R., Sato, Y., Shinso, Y., Suzuki, M., Takeda, J., Tanino, M., Todokoro, F., Yamaguchi, K., Yamamoto, N., Yamasaki, C., Imanishi, T., Okido, T., Tada, M., Ikeo, K., Tateno, Y., Gojobori, T., Lin, Y. C., Wei, F. J., Hsing, Y., Zhao, Q., Han, B., Kramer, M. R., McCombie, R. W., Lonsdale, D., O’donovan, C. C., Whitfield, E. J., Apweiler, R., Koyanagi, K. O., Khurana, J. P., Raghuvanshi, S., Singh, N. K., Tyagi, A. K., Haberer, G., Fujisawa, M., Hosokawa, S., Ito, Y., Ikawa, H., Shibata, M., Yamamoto, M., Bruskiewich, R. M., Hoen, D. R., Bureau, T. E., Namiki, N., Ohyanagi, H., Sakai, Y., Nobushima, S., Sakata, K., Barrero, R. A., Sato, Y., Souvorov, A., Smith-White, B., Tatusova, T., An, S., An, G., Oota, S., Fuks, G., Messing, J., Christie, K. R., Lieberherr, D., Kim, H., Zuccolo, A., Wing, R. A., Nobuta, K., Green, P. J., Lu, C., Meyers, B. C., Chaparro, C., Piegu, B., Panaud, O. & Echeverria, M., Jan 1 2008, In: Nucleic Acids Research. 36, SUPPL. 1

    Research output: Contribution to journalArticlepeer-review

    280 Scopus citations
  • The subtelomere of Oryza sativa chromosome 3 short arm as a hot bed of new gene origination in rice

    Fan, C., Zhang, Y., Yu, Y., Rounsley, S., Long, M. & Wing, R. A., Jan 1 2008, In: Molecular Plant. 1, 5

    Research output: Contribution to journalArticlepeer-review

    26 Scopus citations
  • 2007

    Changes in regulation of a transcription factor lead to autogamy in cultivated tomatoes

    Chen, K. Y., Cong, B., Wing, R., Vrebalov, J. & Tanksley, S. D., Oct 26 2007, In: Science. 318, 5850

    Research output: Contribution to journalArticlepeer-review

    103 Scopus citations
  • Comparative physical mapping between Oryza sativa (AA genome type) and O. punctata (BB genome type)

    Kim, H. R., San Miguel, P., Nelson, W., Collura, K., Wissotski, M., Walling, J. G., Jun, P. K., Jackson, S. A., Soderlund, C. & Wing, R. A., May 1 2007, In: Genetics. 176, 1

    Research output: Contribution to journalArticlepeer-review

    38 Scopus citations
  • Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana: The Rice Annotation Project

    Itoh, T., Tanaka, T., Barrero, R. A., Yamasaki, C., Fujii, Y., Hilton, P. B., Antonio, B. A., Aono, H., Apweiler, R., Bruskiewich, R., Bureau, T., Burr, F., De Oliveira, A. C., Fuks, G., Habara, T., Haberer, G., Han, B., Harada, E., Hiraki, A. T., Hirochika, H. & 75 others, Hoen, D., Hokari, H., Hosokawa, S., Hsing, Y. I., Ikawa, H., Ikeo, K., Imanishi, T., Ito, Y., Jaiswal, P., Kanno, M., Kawahara, Y., Kawamura, T., Kawashima, H., Khurana, J. P., Kikuchi, S., Komatsu, S., Koyanagi, K. O., Kubooka, H., Lieberherr, D., Lin, Y. C., Lonsdale, D., Matsumoto, T., Matsuya, A., McCombie, W. R., Messing, J., Miyao, A., Mulder, N., Nagamura, Y., Nam, J., Namiki, N., Numa, H., Nurimoto, S., O'Donovan, C., Ohyanagi, H., Okido, T., OOta, S., Osato, N., Palmer, L. E., Quetier, F., Raghuvanshi, S., Saichi, N., Sakai, H., Sakai, Y., Sakata, K., Sakurai, T., Sato, F., Sato, Y., Schoof, H., Seki, M., Shibata, M., Shimizu, Y., Shinozaki, K., Shinso, Y., Singh, N. K., Smith-White, B., Takeda, J. I., Tanino, M., Tatusova, T., Thongjuea, S., Todokoro, F., Tsugane, M., Tyagi, A. K., Vanavichit, A., Wang, A., Wing, R. A., Yamaguchi, K., Yamamoto, M., Yamamoto, N., Yu, Y., Zhang, H., Zhao, Q., Higo, K., Burr, B., Gojobori, T. & Sasaki, T., Feb 1 2007, In: Genome Research. 17, 2

    Research output: Contribution to journalArticlepeer-review

    190 Scopus citations
  • Development of a BAC library for yellow-poplar (Liriodendron tulipifera) and the identification of genes associated with flower development and lignin biosynthesis

    Liang, H., Fang, E. G., Tomkins, J. P., Luo, M., Kudrna, D., Kim, H. R., Arumuganathan, K., Zhao, S., Leebens-Mack, J., Schlarbaum, S. E., Banks, J. A., Depamphilis, C. W., Mandoli, D. F., Wing, R. A. & Carlson, J. E., Jul 1 2007, In: Tree Genetics and Genomes. 3, 3

    Research output: Contribution to journalArticlepeer-review

    24 Scopus citations
  • Efficacy of clone fingerprinting methodologies

    Nelson, W. M., Dvorak, J., Luo, M. C., Messing, J., Wing, R. A. & Soderlund, C., Jan 1 2007, In: Genomics. 89, 1

    Research output: Contribution to journalArticlepeer-review

    20 Scopus citations
  • Evolutionary dynamics of an ancient retrotransposon family provides insights into evolution of genome size in the genus Oryza

    Ammiraju, J. S. S., Zuccolo, A., Yu, Y., Song, X., Piegu, B., Chevalier, F., Walling, J. G., Ma, J., Talag, J., Brar, D. S., SanMiguel, P. J., Jiang, N., Jackson, S. A., Panaud, O. & Wing, R. A., Oct 1 2007, In: Plant Journal. 52, 2

    Research output: Contribution to journalArticlepeer-review

    70 Scopus citations
  • Evolutionary history and positional shift of a rice centromere

    Ma, J., Wing, R. A., Bennetzen, J. L. & Jackson, S. A., Oct 1 2007, In: Genetics. 177, 2

    Research output: Contribution to journalArticlepeer-review

    26 Scopus citations
  • Evolution of genes and genomes on the Drosophila phylogeny

    Clark, A. G., Eisen, M. B., Smith, D. R., Bergman, C. M., Oliver, B., Markow, T. A., Kaufman, T. C., Kellis, M., Gelbart, W., Iyer, V. N., Pollard, D. A., Sackton, T. B., Larracuente, A. M., Singh, N. D., Abad, J. P., Abt, D. N., Adryan, B., Aguade, M., Akashi, H., Anderson, W. W. & 395 others, Aquadro, C. F., Ardell, D. H., Arguello, R., Artieri, C. G., Barbash, D. A., Barker, D., Barsanti, P., Batterham, P., Batzoglou, S., Begun, D., Bhutkar, A., Blanco, E., Bosak, S. A., Bradley, R. K., Brand, A. D., Brent, M. R., Brooks, A. N., Brown, R. H., Butlin, R. K., Caggese, C., Calvi, B. R., Bernardo De Carvalho, A., Caspi, A., Castrezana, S., Celniker, S. E., Chang, J. L., Chapple, C., Chatterji, S., Chinwalla, A., Civetta, A., Clifton, S. W., Comeron, J. M., Costello, J. C., Coyne, J. A., Daub, J., David, R. G., Delcher, A. L., Delehaunty, K., Do, C. B., Ebling, H., Edwards, K., Eickbush, T., Evans, J. D., Filipski, A., Findeiß, S., Freyhult, E., Fulton, L., Fulton, R., Garcia, A. C. L., Gardiner, A., Garfield, D. A., Garvin, B. E., Gibson, G., Gilbert, D., Gnerre, S., Godfrey, J., Good, R., Gotea, V., Gravely, B., Greenberg, A. J., Griffiths-Jones, S., Gross, S., Guigo, R., Gustafson, E. A., Haerty, W., Hahn, M. W., Halligan, D. L., Halpern, A. L., Halter, G. M., Han, M. V., Heger, A., Hillier, L. D., Hinrichs, A. S., Holmes, I., Hoskins, R. A., Hubisz, M. J., Hultmark, D., Huntley, M. A., Jaffe, D. B., Jagadeeshan, S., Jeck, W. R., Johnson, J., Jones, C. D., Jordan, W. C., Karpen, G. H., Kataoka, E., Keightley, P. D., Kheradpour, P., Kirkness, E. F., Koerich, L. B., Kristiansen, K., Kudrna, D., Kulathinal, R. J., Kumar, S., Kwok, R., Lander, E., Langley, C. H., Lapoint, R., Lazzaro, B. P., Lee, S. J., Levesque, L., Li, R., Lin, C. F., Lin, M. F., Lindblad-Toh, K., Llopart, A., Long, M., Low, L., Lozovsky, E., Lu, J., Luo, M., Machado, C. A., Makalowski, W., Marzo, M., Matsuda, M., Matzkin, L., McAllister, B., McBride, C. S., McKernan, B., McKernan, K., Mendez-Lago, M., Minx, P., Mollenhauer, M. U., Montooth, K., Mount, S. M., Mu, X., Myers, E., Negre, B., Newfeld, S., Nielsen, R., Noor, M. A. F., O'Grady, P., Pachter, L., Papaceit, M., Parisi, M. J., Parisi, M., Parts, L., Pedersen, J. S., Pesole, G., Phillippy, A. M., Ponting, C. P., Pop, M., Porcelli, D., Powell, J. R., Prohaska, S., Pruitt, K., Puig, M., Quesneville, H., Ravi Ram, K., Rand, D., Rasmussen, M. D., Reed, L. K., Reenan, R., Reily, A., Remington, K. A., Rieger, T. T., Ritchie, M. G., Robin, C., Rogers, Y. H., Rohde, C., Rozas, J., Rubenfield, M. J., Ruiz, A., Russo, S., Salzberg, S. L., Sanchez-Gracia, A., Saranga, D. J., Sato, H., Schaeffer, S. W., Schatz, M. C., Schlenke, T., Schwartz, R., Segarra, C., Singh, R. S., Sirot, L., Sirota, M., Sisneros, N. B., Smith, C. D., Smith, T. F., Spieth, J., Stage, D. E., Stark, A., Stephan, W., Strausberg, R. L., Strempel, S., Sturgill, D., Sutton, G., Sutton, G. G., Tao, W., Teichmann, S., Tobari, Y. N., Tomimura, Y., Tsolas, J. M., Valente, V. L. S., Venter, E., Craig Venter, J., Vicario, S., Vieira, F. G., Vilella, A. J., Villasante, A., Walenz, B., Wang, J., Wasserman, M., Watts, T., Wilson, D., Wilson, R. K., Wing, R. A., Wolfner, M. F., Wong, A., Ka-Shu Wong, G., Wu, C. I., Wu, G., Yamamoto, D., Yang, H. P., Yang, S. P., Yorke, J. A., Yoshida, K., Zdobnov, E., Zhang, P., Zhang, Y., Zimin, A. V., Baldwin, J., Abdouelleil, A., Abdulkadir, J., Abebe, A., Abera, B., Abreu, J., Christophe Acer, S., Aftuck, L., Alexander, A., An, P., Anderson, E., Anderson, S., Arachi, H., Azer, M., Bachantsang, P., Barry, A., Bayul, T., Berlin, A., Bessette, D., Bloom, T., Blye, J., Boguslavskiy, L., Bonnet, C., Boukhgalter, B., Bourzgui, I., Brown, A., Cahill, P., Channer, S., Cheshatsang, Y., Chuda, L., Citroen, M., Collymore, A., Cooke, P., Costello, M., D'Aco, K., Daza, R., De Haan, G., Degray, S., Demaso, C., Dhargay, N., Dooley, K., Dooley, E., Doricent, M., Dorje, P., Dorjee, K., Dupes, A., Elong, R., Falk, J., Farina, A., Faro, S., Ferguson, D., Fisher, S., Foley, C. D., Franke, A., Friedrich, D., Gadbois, L., Gearin, G., Gearin, C. R., Giannoukos, G., Goode, T., Graham, J., Grandbois, E., Grewal, S., Gyaltsen, K., Hafez, N., Hagos, B., Hall, J., Henson, C., Hollinger, A., Honan, T., Huard, M. D., Hughes, L., Hurhula, B., Erii Husby, M., Kamat, A., Kanga, B., Kashin, S., Khazanovich, D., Kisner, P., Lance, K., Lara, M., Lee, W., Lennon, N., Letendre, F., Levine, R., Lipovsky, A., Liu, X., Liu, J., Liu, S., Lokyitsang, T., Lokyitsang, Y., Lubonja, R., Lui, A., MacDonald, P., Magnisalis, V., Maru, K., Matthews, C., McCusker, W., McDonough, S., Mehta, T., Meldrim, J., Meneus, L., Mihai, O., Mihalev, A., Mihova, T., Mittelman, R., Mlenga, V., Montmayeur, A., Mulrain, L., Navidi, A., Naylor, J., Negash, T., Nguyen, T., Nguyen, N., Nicol, R., Norbu, C., Norbu, N., Novod, N., O'Neill, B., Osman, S., Markiewicz, E., Oyono, O. L., Patti, C., Phunkhang, P., Pierre, F., Priest, M., Raghuraman, S., Rege, F., Reyes, R., Rise, C., Rogov, P., Ross, K., Ryan, E., Settipalli, S., Shea, T., Sherpa, N., Shi, L., Shih, D., Sparrow, T., Spaulding, J., Stalker, J., Stange-Thomann, N., Stavropoulos, S., Stone, C., Strader, C., Tesfaye, S., Thomson, T., Thoulutsang, Y., Thoulutsang, D., Topham, K., Topping, I., Tsamla, T., Vassiliev, H., Vo, A., Wangchuk, T., Wangdi, T., Weiand, M., Wilkinson, J., Wilson, A., Yadav, S., Young, G., Yu, Q., Zembek, L., Zhong, D., Zimmer, A., Zwirko, Z., Alvarez, P., Brockman, W., Butler, J., Chin, C., Grabherr, M., Kleber, M., Mauceli, E. & MacCallum, I., Nov 8 2007, In: Nature. 450, 7167

    Research output: Contribution to journalArticlepeer-review

    1469 Scopus citations
  • Magnaporthe grisea infection triggers RNA variation and antisense transcript expression in rice

    Gowda, M., Venu, R. C., Li, H., Jantasuriyarat, C., Chen, S., Bellizzi, M., Pampanwar, V., Kim, H., Dean, R. A., Stahlberg, E., Wing, R., Soderlund, C. & Wang, G. L., May 1 2007, In: Plant Physiology. 144, 1

    Research output: Contribution to journalArticlepeer-review

    25 Scopus citations
  • Microcolinearity and genome evolution in the AdhA region of diploid and polyploid cotton (Gossypium)

    Grover, C. E., Kim, H., Wing, R. A., Paterson, A. H. & Wendel, J. F., Jun 1 2007, In: Plant Journal. 50, 6

    Research output: Contribution to journalArticlepeer-review

    64 Scopus citations
  • Physical and genetic structure of the maize genome reflects its complex evolutionary history

    Wei, F., Coe, E., Nelson, W., Bharti, A. K., Engler, F., Butler, E., Kim, H. R., Goicoechea, J. L., Chen, M., Lee, S., Fuks, G., Sanchez-Villeda, H., Schroeder, S., Fang, Z., McMullen, M., Davis, G., Bowers, J. E., Paterson, A. H., Schaeffer, M., Gardiner, J. & 4 others, Cone, K., Messing, J., Soderlund, C. & Wing, R. A., Jul 1 2007, In: PLoS Genetics. 3, 7

    Research output: Contribution to journalArticlepeer-review

    225 Scopus citations
  • Plant centromere organization: a dynamic structure with conserved functions

    Ma, J., Wing, R. A., Bennetzen, J. L. & Jackson, S. A., Mar 1 2007, In: Trends in Genetics. 23, 3

    Research output: Contribution to journalArticlepeer-review

    108 Scopus citations
  • RL-SAGE and microarray analysis of the rice transcriptome after Rhizoctonia solani infection

    Venu, R. C., Jia, Y., Gowda, M., Jia, M. H., Jantasuriyarat, C., Stahlberg, E., Li, H., Rhineheart, A., Boddhireddy, P., Singh, P., Rutger, N., Kudrna, D., Wing, R., Nelson, J. C. & Wang, G. L., Oct 1 2007, In: Molecular Genetics and Genomics. 278, 4

    Research output: Contribution to journalArticlepeer-review

    41 Scopus citations
  • The barley ERF-type transcription factor HvRAF confers enhanced pathogen resistance and salt tolerance in Arabidopsis

    Jung, J., Won, S. Y., Suh, S. C., Kim, H., Wing, R., Jeong, Y., Hwang, I. & Kim, M., Feb 1 2007, In: Planta. 225, 3

    Research output: Contribution to journalArticlepeer-review

    88 Scopus citations